Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928732.1_cds_XP_016476248.1_68097

CDS Infomation

[gene=LOC107797839] [db_xref=GeneID:107797839] [protein=pre-mRNA-processing protein 40A-like isoform X2] [protein_id=XP_016476248.1] [location=complement(join(88362..88499,88591..89001,94245..94347,94462..94526,94633..94740,97358..97450,97536..97583,98002..98100,98246..98362,98482..98535,99419..99511,100395..100475,101064..101169,101271..101305,101856..101942,102129..102206,102281..102349,102466..102564,102819..102888,102981..103321,103408..103465,103562..103614,107604..107673,107877..107941,114413..114556,114691..114987,115105..115170,115694..115726))] [gbkey=CDS]

Sequence

ATGGCCAGTAATCCTCCGCCATCTGGTCCACAGCCTCTTTGGCCTCCTTCAGTTGGATCC
ACACCACCTCAAGGTTTTGGTTCATCATTTCCCATGCAACAAGGCCAGCCCTTTGCTTCA
TCAATTTCAGCCTCTCCACAGTATCGCCCTGTTGGACAAACATCAAATGCTGGAATGCCT
CCTGGTCATCATAGTCAAATACCCCAGTTTTCTCAACCAATGCAACAGTTTCCCCCGAGG
CCCAATCAGCCTGGCCATGGTATACTTTTATCTCAGGCAATTCAGATGCCATTTATCCAA
TCAAGTATGCCACAACCTCAACAAGTCATTCCGCCTTTGAATAGTCACATGCCTGGTGTT
AGTGGTGCTGGAAATCCATTTTCATCATCATATACGGTTCAATCGTCATCCCAAATGCAT
GTTCCTTCTTTCCCTTCGGGGGGGCAACCTTGGCTGTCATCTGGAAGTCAAAACACACCA
GTGACTGCCCCTACTTTACTGACCAATCAGCAATTGTCAGCTATAGCTCCATCCGTTCCG
GCGGGCACAGCTTCACCACAGAATGCGTCTGACTGGCAAGAGTATGAAGCTGCTGATGGG
AGACGATATTACTACAATAAAATTACAAAGCAATCCAGCTGGGAGAAGCCTTTGGAGCTG
ATGACACCTTTAGAGAGAGCTGATGCGTCGACGGTATGGAAAGAATTCACAACTGCAGAT
GGTCGAAAGTATTACTACAACAAAGAAACAAAGCAGTCTAAGTGGACAATACCTGAGGAA
CTAAAGTTGGCTCGTGAACTGGCGGAAAAATCTGCTGGTCAAGTAGTTCAGACCGGAGCA
AGCACAACTTCTGGTGTGCAAGTCACTGCAGCTGTAACTTCAACAGAACAACCATCTGCT
GTCACCCCGGTTAGCTTCACCCCTTCTTCAACGGTTTCTGGAGTAGCTTCAAGCCCTGTT
CCAGTTACATCTGCTGTTTCTGATCATGCTTCACCTCTGGTGGTTTCTGGATCATCAGCC
ATTCCTGCTGTGACCCCTGCGATGCCAAGTTCATCTGGTGTCTCTTCACCCGCTGTTTCA
GGGAGTACAGGATCTGCTGCTCTAGCTAATGCCAGTCAGACACAAATGAGTGGCTTTGAA
AATTTATCTCCGCAAGTTTCTAGTTCTTTAAGTGGAGCTTCTATTCAGGATATTGAGGAG
GCAAAGAAGGGCATGGCAGTTGCTGGGAAGGTTAATGTGGTACCTGCAGAGGAGAAAACA
ACAGAAGAAGAACCTTTTCTATATGCGACCAAGCAGGAGGCTAAAAATGCGTTCAAAGCG
CTGCTAGAGTTTGCTAATGTTGAATCTGATTGGACATGGGAGCAGACAATGCGAGTAATA
ATCAACGATAAGCGATATGGCGCTCTGAAAACTCTTGGTGAGCGGAAACAGGCATTCAAT
GAGTACTTGATGCAAAGGAAGAAACAGGAGGCTGAGGAGAGGCGCCATAGACAAAGAAAG
GCAAAAGAAGAATTCACAAAGATGTTAGAGGAGTCCAAGGAACTCATTTCATCTACTAGA
TGGAGTAAGGCAGTAACCATGTTTGAGGATGATGAACGGTTCAAGGCCGTTGAACGAGAG
GCTGATCGTGAAGATCTCTTCAGGAACTACTTGGTGGATCTGCAGAAAAAGGAGAGGGCA
AAGGCTCAAGAGGAGTATCGACAAAATAGATTGGAGTACAGACATTTTTTGGAGACTTGT
GGCTTTATCAAGGTAGATACCCAGTGGCGCAAAGTCCAAGATCTTCTGGAAGATGATGAA
AGATGTTTGCGCCTTGAAAAAATCGATCGTTTAGATATTTTCCAGGAATACATCCGTGAC
CTGGAGAAGGAGGACGAAGAACAGAGAAAATTGCAAAAGGAACAATTGAGGCGCACAGAG
CGTAAGAACCGGGATGCATTTCGAAAGATGATGGAGGAGCAAATCACTGCAGGCACGCTT
ACTGCGAAAACATCTTGGCGTGATTATTGTCAGATGGTTAAGGAGTCTGTGGCTTATCAG
GCTGTTGCATCAAACACTTCTGGTTCGACACCAAAGGATTTGTTTGAAGATGTCGTTGAA
GAGTTGGAAAAACAGTACCATGAAGACAAGATTCGAGTAAAAGATGTAGTTAAGTCAGAA
AAGATCACGATCTCATCAACATGGACATTCGAAGACTTTAAAGCTACTATTTTGGAAGGA
ATTGGTTCCCCATCCATTCATGATGTTAATCTACAGCTCATTTTTGAGGATCTAATTGAG
AGAGCAAAGGAGAAAGAAGAAAAAGAAACTAAAAAGCGTCAAAGGCTTGCAAAAGATTTC
ACTGACAAGCTTAGTACCATTAAGGAAATAACTGCTTCCTCTAGTTGGGAGGAGTGCAAA
GAACTTGTGGAGGACACCTCAGAGTTCAGAGCTATTGGTGAAGAAACAATCTCAAGGGCA
GTCTTTGAGGAATACGTTGCATGGTTGCAGGAGAAGGCAAAGGAAAAAGAACGCAGACGA
GAGGAGGAAAAGGCCAAAAAGGAGAAAGAAAAAGAGGAAAAAGAGAAGAGAAAGGATAAG
GAGAGAAGGGAAAAAGAGAGAGAGAAGGAAAAAGAGCGTGACAAGGAAAAAGAAAGGGGA
AACGAACGAGCAACAAAAGATGAGGCAGATAGCGAGAGTATGGATGTTACAGATAACTAT
GAGCCCAAAGAAGAGAGAAAAAGAGAAAAAGACAGAGAGAGGAAACATCGGAAGCGACAC
CATATCTCTAACGATGAGGTGACTTCTGACAAGGATGAGAAAGAGGAACCTGAAAGAGAC
AAGGAGAGGAAACACCGGAAGCGACACCATAGCTCTAACGATGAGCTGGCATCTGACAAG
GACGAGAAAGAGGAATCTAAAAGGTCCCGCCGACATAGCAGTGATCGTAAAAAGTCAAAG
AAGCTTGCACACTCACCTGAATCCGATGGTGAAAGTCGGCATAAAAGACACAGAAGAGAT
CATAGGGATGGATCACGTCGAAATGGTGGTGGTTATGAAGAGTTAGAAGATGGGGAGCTT
GGTGAAGATGGAGAAAGTTGA

Peptide Sequence

PEP ID

XP_016476248.1

PEP Infomation

PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Nicotiana tabacum]

Sequence

MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQQGQPFASSISASPQYRPVGQTSNAGMP
PGHHSQIPQFSQPMQQFPPRPNQPGHGILLSQAIQMPFIQSSMPQPQQVIPPLNSHMPGV
SGAGNPFSSSYTVQSSSQMHVPSFPSGGQPWLSSGSQNTPVTAPTLLTNQQLSAIAPSVP
AGTASPQNASDWQEYEAADGRRYYYNKITKQSSWEKPLELMTPLERADASTVWKEFTTAD
GRKYYYNKETKQSKWTIPEELKLARELAEKSAGQVVQTGASTTSGVQVTAAVTSTEQPSA
VTPVSFTPSSTVSGVASSPVPVTSAVSDHASPLVVSGSSAIPAVTPAMPSSSGVSSPAVS
GSTGSAALANASQTQMSGFENLSPQVSSSLSGASIQDIEEAKKGMAVAGKVNVVPAEEKT
TEEEPFLYATKQEAKNAFKALLEFANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFN
EYLMQRKKQEAEERRHRQRKAKEEFTKMLEESKELISSTRWSKAVTMFEDDERFKAVERE
ADREDLFRNYLVDLQKKERAKAQEEYRQNRLEYRHFLETCGFIKVDTQWRKVQDLLEDDE
RCLRLEKIDRLDIFQEYIRDLEKEDEEQRKLQKEQLRRTERKNRDAFRKMMEEQITAGTL
TAKTSWRDYCQMVKESVAYQAVASNTSGSTPKDLFEDVVEELEKQYHEDKIRVKDVVKSE
KITISSTWTFEDFKATILEGIGSPSIHDVNLQLIFEDLIERAKEKEEKETKKRQRLAKDF
TDKLSTIKEITASSSWEECKELVEDTSEFRAIGEETISRAVFEEYVAWLQEKAKEKERRR
EEEKAKKEKEKEEKEKRKDKERREKEREKEKERDKEKERGNERATKDEADSESMDVTDNY
EPKEERKREKDRERKHRKRHHISNDEVTSDKDEKEEPERDKERKHRKRHHSSNDELASDK
DEKEESKRSRRHSSDRKKSKKLAHSPESDGESRHKRHRRDHRDGSRRNGGGYEELEDGEL
GEDGES

Transcript Sequence

Gene sequence data has not been registered.